Evaluating Protocols & Launching Runs
Previewing Protocol Output
Previewing a protocol supplies a script with parameters supplied in the "preview" section of a manifest.json
file. Read more about this below.

Analyzing a Protocol
To check whether your Autoprotocol is valid using Strateos's server-side checker, pipe any script that prints Autoprotocol to STDOUT to transcriptic analyze
:
$ python my_protocol.py | transcriptic analyze
✓ Protocol analyzed
2 instructions
1 container

Launching a Run from a Protocol
Supply a project name or id to submit a run to:


Launching a Run in Test Mode
The --test
flag allows a run to be submitted in test mode, meaning it will never be executed
$ python my_protocol.py | transcriptic submit --project "sequencing" --title "Sequencing run" --test
Translating a Protocol to English
Pipe any valid Autoprotocol to transcriptic summarize
to get a summary of each step:

Updated over 2 years ago